Hey, thanks for the report. This is a known issue: files that were previously touched by Agent or Composer get marked as changed on every IDE start. It’s usually an EOF or whitespace change, not real code.
Related reports:
- Cursor creates phantom unsaved changes on every restart (requires discarding multiple files)
- The cursor adds blank lines
This should’ve been fixed in 2.3.x, but there are reports that it came back in later 2.3.x builds.
Temporary workaround:
- Open Source Control
- Open each “changed” file
- If you see the “Keep” button (Agent Review overlay), click it
- After that, the file should stop showing up after restart
Need a bit more info:
- You’re on 2.3.41. Does it still happen on the latest version? Check Help > Check for Updates
- Can you share a
git difffor one of the “changed” files? We want to confirm if it’s whitespace or EOF vs real code changes - Are you using Agent or Composer modes?
Let me know what you find. If this is a regression on the latest version, I’ll pass it to the team.