Depending on the number of papers and size you can try Tutorial: Adding full repo context, pdfs and other docs
I not sure what your specific use-case is. But if you have a collection of papers within a topic, you will need multi-hop, advanced reasoning ect,. and a KG RAG or similar would be my choice. You could try doing something with obsidian, hosting the informations you need adding it that way - I have not tried, and dont know if it is possible.
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