Manual Mode is changing files

Before I used the manual mode to ask for some analysis, special investigation to me eventually improve the prompt, which did not result in consequences for my code. Now this Manual Mode is partially changing my files and most of the time creating errors and breaking my code.

What I expect:
Manual mode menu should not change my code automatically.

Version: 0.50.7
Agent previously selected: [thinking] claude-4-sonnet

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