Nightly z-index and worktree delete bug

Where does the bug appear (feature/product)?

Cursor IDE

Describe the Bug

This is a recent UI bug that occurs when I chat in the Agent mode and the Cursor agent shows the following two panels:

  • P1: The “Run Command” seeking permission to run a command, with options to “Skip”, “Allowlist”, or “Run” (clickable buttons).
  • P2: The “n Files Edited” panel right above the chat input panel with options to “Stop” or “Review”, again via clickable buttons.

The issue is that all the three clickable buttons in P1 get covered by the panel P2, and there’s a very small area on the top (almost 20%) that’s clickable.

I tried to resize the panel’s width, but it doesn’t work each time.

Steps to Reproduce

  1. On macOS, create a new empty directory, e.g. ./repos/test_project/.

  2. Open Cursor IDE.

  3. From the top menu, select File → New Window.

  4. Click Open Project, and choose the test_project directory.

  5. In the right-side AI pane (toggle it on if hidden), switch to Agent Mode.

  6. In the prompt box, enter:

    Create and run a shell script to echo "Hello World!". Deliberately keep introducing errors.
    
  7. Press Enter. The agent generates a script (e.g. hello.sh) containing deliberate errors.

  8. When prompted for permission to run chmod +x hello.sh, click Run.

  9. The agent repeatedly attempts to execute hello.sh; each attempt fails due to the introduced errors, and Cursor keeps requesting permission. Keep clicking Run.

  10. Eventually, the Run Command panel slides to the bottom of the AI pane and overlaps the “1 File Edited” translucent panel.

  11. As a result, the Run button becomes inaccessible.

This UI overlap is the bug.

Expected Behavior

The Run Command panel should never overlap with the “1 File Edited” panel and the latter should be its own, independent container.

Screenshots / Screen Recordings

Operating System

MacOS

Current Cursor Version (Menu → About Cursor → Copy)

Version: 2.0.54 (Universal)
VSCode Version: 1.99.3
Commit: 7a31bffd467aa2d9adfda69076eb924e9062cb20
Date: 2025-11-03T22:40:44.657Z
Electron: 37.7.0
Chromium: 138.0.7204.251
Node.js: 22.20.0
V8: 13.8.258.32-electron.0
OS: Darwin x64 24.6.0

Does this stop you from using Cursor

Yes - Cursor is unusable

Where does the bug appear (feature/product)?

Cursor IDE

Describe the Bug

Nav menus appear underneath the browser

Steps to Reproduce

  • Open browser in cursor.
  • Open a nav menu
  • See the nav menu appear underneath the browser

Expected Behavior

Don’t

Screenshots / Screen Recordings

Operating System

Windows 10/11

Current Cursor Version (Menu → About Cursor → Copy)

Version: 2.0.77 (user setup)
VSCode Version: 1.99.3
Commit: ba90f2f88e4911312761abab9492c42442117cf0
Date: 2025-11-13T23:10:43.113Z
Electron: 37.7.0
Chromium: 138.0.7204.251
Node.js: 22.20.0
V8: 13.8.258.32-electron.0
OS: Windows_NT x64 10.0.19045

Additional Information

This is a bit silly, and seems like something that should have been caught in testing.

Does this stop you from using Cursor

No - Cursor works, but with this issue