In Composer it asks every time, “Would you like me to continue with fixing the other files?” and then waits for a few seconds and continues, and then asks again. But you’re in that response dialog, and if you type “Yes” and press Enter, the Enter activates the “Accept Changes” button.
And if it stopped when there’s no Accept Changes, then you’re sending “Yes” with whatever files added in context.
Maybe it asks itself, like it’s thinking “would I like to continue, or it’s time for a break?”